BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027F11SP1|AL428769
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1636 1657 0.0
3x_Contig1722 165 1e-40
3x_Contig1622 163 6e-40
3x_Contig1486 163 6e-40
3x_Contig1727 155 1e-37
>3x_Contig1636
Length = 15667
Score = 1657 bits (834), Expect = 0.0
Identities = 861/869 (99%), Gaps = 2/869 (0%)
Strand = Plus / Minus
Query: 1 atcatgtgatatgaacctaacatcattttatcatataacatggcaacatggccgagcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6439 atcatgtgatatgaacctaacatcattttatcatataacatggcaacatggccgagcggt 6380
Query: 61 taaggcgaaagattagaaatcttttgggctctgcc-gcgcaggttcgagtcctgctgttg 119
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6379 taaggcgaaagattagaaatcttttgggctctgcccgcgcaggttcgagtcctgctgttg 6320
Query: 120 tcgttatttttaaccccttcttcctttattttttgacgcgttgccatttctcattacccg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6319 tcgttatttttaaccccttcttcctttattttttgacgcgttgccatttctcattacccg 6260
Query: 180 gaaaattattcctctttcttttccaaaaacggaaaagatattgacgaaaacatcaaatct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6259 gaaaattattcctctttcttttccaaaaacggaaaagatattgacgaaaacatcaaatct 6200
Query: 240 catttctctttgccgtattctgttggtaaaatacagctgaaactcgattctgacaaaaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6199 catttctctttgccgtattctgttggtaaaatacagctgaaactcgattctgacaaaaat 6140
Query: 300 aaactagaagaaccatatcaagaacgtttctatcccagaacagcactggtgccaatgaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6139 aaactagaagaaccatatcaagaacgtttctatcccagaacagcactggtgccaatgaaa 6080
Query: 360 cattaatttttagcaccttcattttaataatattattgcatttatcgctccctgtttaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6079 cattaatttttagcaccttcattttaataatattattgcatttatcgctccctgtttaaa 6020
Query: 420 ggactttgctactgaaaaacaccataagtaccgaattcaatcatgagtgatgctatgaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6019 ggactttgctactgaaaaacaccataagtaccgaattcaatcatgagtgatgctatgaat 5960
Query: 480 caaacaagtgatgctgtctttacagacagaatgcgaaggtttcaagagtttttggatacc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5959 caaacaagtgatgctgtctttacagacagaatgcgaaggtttcaagagtttttggatacc 5900
Query: 540 cattcgcattatactcgagaaataagatcaatactcgagtttaacagcaacgtagtrgaa 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5899 cattcgcattatactcgagaaataagatcaatactcgagtttaacagcaacgtagtgaaa 5840
Query: 600 gagaaaaagacggatgatgattatttaaatactgcagacaaagatacgatggaccatgac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5839 gagaaaaagacggatgatgattatttaaatactgcagacaaagatacgatggaccatgac 5780
Query: 660 actaatcaattgccattgagaataacagtatcacttgacgatttaagagaatttgacaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5779 actaatcaattgccattgagaataacagtatcacttgacgatttaagagaatttgacaaa 5720
Query: 720 acattttggactggacttttacaagtaccctcgttctttttaccaccagcggagkvgnct 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5719 acattttggactggacttttacaagtaccctcgttctttttaccaccagcggagcgtgct 5660
Query: 780 gtttcggagactgcaatggccttagatgatagccctctcgggtttcgcgggattccaaaa 839
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5659 gtttcggagactgcaatggccttagatgatagccctctcgggtttcgc-ggattccaaaa 5601
Query: 840 tgatcccagcagacaatggagactgtcat 868
|||||||||||||||||||||||||||||
Sbjct: 5600 tgatcccagcagacaatggagactgtcat 5572
>3x_Contig1722
Length = 17718
Score = 165 bits (83), Expect = 1e-40
Identities = 90/91 (98%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 41 tggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctg-ccgcgc 99
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1722 tggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgc 1663
Query: 100 aggttcgagtcctgctgttgtcgttattttt 130
|||||||||||||||||||||||||||||||
Sbjct: 1662 aggttcgagtcctgctgttgtcgttattttt 1632
>3x_Contig1622
Length = 13445
Score = 163 bits (82), Expect = 6e-40
Identities = 89/90 (98%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 42 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctg-ccgcgca 100
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4247 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 4306
Query: 101 ggttcgagtcctgctgttgtcgttattttt 130
||||||||||||||||||||||||||||||
Sbjct: 4307 ggttcgagtcctgctgttgtcgttattttt 4336
Score = 155 bits (78), Expect = 1e-37
Identities = 88/90 (97%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 42 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctg-ccgcgca 100
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4752 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 4811
Query: 101 ggttcgagtcctgctgttgtcgttattttt 130
||||||||||||||||||||||| ||||||
Sbjct: 4812 ggttcgagtcctgctgttgtcgtcattttt 4841
>3x_Contig1486
Length = 12131
Score = 163 bits (82), Expect = 6e-40
Identities = 89/90 (98%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 42 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctg-ccgcgca 100
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 11493 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 11434
Query: 101 ggttcgagtcctgctgttgtcgttattttt 130
||||||||||||||||||||||||||||||
Sbjct: 11433 ggttcgagtcctgctgttgtcgttattttt 11404
>3x_Contig1727
Length = 17872
Score = 155 bits (78), Expect = 1e-37
Identities = 85/86 (98%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 42 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctg-ccgcgca 100
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 13283 ggcaacatggccgagcggttaaggcgaaagattagaaatcttttgggctctgcccgcgca 13342
Query: 101 ggttcgagtcctgctgttgtcgttat 126
||||||||||||||||||||||||||
Sbjct: 13343 ggttcgagtcctgctgttgtcgttat 13368
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7116
Number of Sequences: 1807
Number of extensions: 7116
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 5
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)